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Journal article
Species identification of Late Pleistocene bat bones using collagen fingerprinting
Bats form the second most diverse mammalian order (Chiroptera), after rodents, and vary widely in their physiology and ecology. Those species that live in temperate climates are generally insectivorous and nocturnal or crepuscular, sheltering in tree hollows, caves, or buildings during the day. They are potentially valuable ecological indicators, due...Buckley, Michael ; Herman, Jeremy S
collagen, Chiroptera, ancient bats, caves, hibernation, and fingerprinting
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Journal article
Cyprus as an ancient hub for house mice and humans
Aim The distribution of the western house mouse (Mus musculus domesticus) around the world has been strongly influenced by the movement of humans. The close association between the house mouse and human phylogeography has been primarily studied in the peripheral distribution of the species. Here, we inferred the complex colonization...García‐Rodríguez, Oxala ; Andreou, Demetra ; Herman, Jeremy S ; Mitsainas, George P ; Searle, Jeremy B …
house mouse, phylogeography, mtDNA, human, bioproxy, and Cyprus
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Book chapter
Land bridge calibration of rates of molecular evolution in a widespread rodent
There is mounting evidence that rates of molecular evolution decay over recent timescales. Care is needed, therefore, to apply appropriate rates whenever molecular variation is analysed within a temporal context. Given their focus on recent events, intraspecific phylogeographic and demographic studies are particularly vulnerable to erroneous application of rates appropriate...Herman, Jeremy S ; Paupério, J ; Alves, P C ; Searle, Jeremy B
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Journal article
Combined visual and biochemical analyses confirm depositor and diet for Neolithic coprolites from Skara Brae
Coprolites (fossilized faeces) can provide valuable insights into species’ diet and related habits. In archaeozoological contexts, they are a potential source of information on human-animal interactions as well as human and animal subsistence. However, despite a broad discussion on coprolites in archaeology, such finds are rarely subject to detailed examination... -
Journal article
Genetic structure in Orkney island mice: isolation promotes morphological diversification
Following human occupation, the house mouse has colonised numerous islands, exposing the species to a wide variety of environments. Such a colonisation process, involving successive founder events and bottlenecks, may either promote random evolution or facilitate adaptation, making the relative importance of adaptive and stochastic processes in insular evolution difficult...Chevret, Pascale ; Hautier, Lionel ; Ganem, Guila ; Herman, Jeremy S ; Agret, Sylvie …
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Journal article
Post-glacial partitioning of mitochondrial genetic variation in the field vole
Genetic markers are often used to examine population history. There is considerable debate about the behaviour of molecular clock rates around the population-species transition. Nevertheless, appropriate calibration is critical to any inference regarding the absolute timing and scale of demographic changes. Here, we use a mitochondrial cytochrome b gene genealogy,...Herman, Jeremy S ; Searle, Jeremy B
Younger Dryas, gene genealogy, molecular clock, phylogeography, Microtus agrestis, and population history
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Journal article
Of mice and (Viking?) men: phylogeography of British and Irish house mice
The west European subspecies of house mouse (Mus musculus domesticus) has gained much of its current widespread distribution through commensalism with humans. This means that the phylogeography of M. m. domesticus should reflect patterns of human movements. We studied restriction fragment length polymorphism (RFLP) and DNA sequence variations in mouse... -
Journal article
Colonization of Ireland: revisiting ‘the pygmy shrew syndrome’ using mitochondrial, Y chromosomal and microsatellite markers
There is great uncertainty about how Ireland attained its current fauna and flora. Long-distance human-mediated colonization from southwestern Europe has been seen as a possible way that Ireland obtained many of its species; however, Britain has (surprisingly) been neglected as a source area for Ireland. The pygmy shrew has long...McDevitt, A D ; Vega, R ; Rambau, Ramugondo V ; Yannic, G ; Herman, Jeremy S …
phylogeography, cytochrome b, British Isles, human introduction, Sorex minutus, and range expansion
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Journal article
Cryptic speciation in the field vole: a multilocus approach confirms three highly divergent lineages in Eurasia
Species are generally described from morphological features, but there is growing recognition of sister forms that show substantial genetic differentiation without obvious morphological variation and may therefore be considered 'cryptic species'. Here, we investigate the field vole (Microtus agrestis), a Eurasian mammal with little apparent morphological differentiation but which, on...Pauperio, J ; Herman, Jeremy S ; Melo-Ferraira, J ; Jaarola, M ; Alves, P C …
species tree, demography, cryptic species, phylogeography, and Microtus agrestis
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Journal article
Climate and refugial origin influence the mitochondrial lineage distribution of weasels (Mustela nivalis) in a phylogeographic suture zone
Overarching trends can be seen in European mammalian phylogeography, yet it is clear that species responded differently depending on adaptations to past environments. We built upon previous work on the phylogeography of weasels (Mustela nivalis) in Europe by using well-preserved museum specimens from a proposed phylogeographic suture zone. The complete...McDevitt, Allan D ; Zub, Karol ; Kawalko, Agata ; Oliver, Matthew K ; Herman, Jeremy S …
adaptation, phylogeography, cytochrome b, museum specimens, and Carpathian refugium