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Suchergebnisse
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2014
Journal article
Species identification of archaeological marine mammals using collagen fingerprinting
Throughout human history, coastal and marine resources have been a vital part of human subsistence. As a result archaeological faunal assemblages from coastal sites often contain large quantities of skeletal remains indicative of human interaction with marine mammals. However, these are often hard to identify due to a unique combination...Buckley, M ; Fraser, S ; Herman, Jeremy S ; Melton, N D ; Mulville, J …
Proteomics, Cetaceans, Marine mammals, Pinnipeds, Archaeological collagen, ZooMS, and Species identification
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2014
Journal article
Land-bridge calibration of molecular clocks and the post-glacial colonization of Scandinavia by the Eurasian field vole Microtus agrestis
Phylogeography interprets molecular genetic variation in a spatial and temporal context. Molecular clocks are frequently used to calibrate phylogeographic analyses, however there is mounting evidence that molecular rates decay over the relevant timescales. It is therefore essential that an appropriate rate is determined, consistent with the temporal scale of the...Herman, Jeremy S ; McDevitt, Allan D ; Kawalko, Agato ; Jaarolo, Maarit ; Wójcik, J M …
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2014
Book chapter
Land bridge calibration of rates of molecular evolution in a widespread rodent
There is mounting evidence that rates of molecular evolution decay over recent timescales. Care is needed, therefore, to apply appropriate rates whenever molecular variation is analysed within a temporal context. Given their focus on recent events, intraspecific phylogeographic and demographic studies are particularly vulnerable to erroneous application of rates appropriate...Herman, Jeremy S ; Paupério, J ; Alves, P C ; Searle, Jeremy B
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2015
Journal article
Post-glacial colonization of eastern Europe by small mammals that survived in the Carpathian refugium: evidence from mitochondrial DNA of the common vole
There is now considerable evidence for the survival of temperate species within glacial refugia that were situated at relatively high latitudes, notably the Carpathian Basin and Dordogne region in Europe. However, the prevalence of fossil remains in such locations is rarely matched by molecular evidence for their contribution to subsequent...Stojak, Joanna ; McDevitt, Allan D ; Herman, Jeremy S ; Searle, Jeremy B ; Wójcik, Jan M
phylogeography, glacial refugia, cytochrome b, museum specimens, Last Glacial Maximum, and small mammals
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2016
Journal article
R2d2 drives selfish sweeps in the house mouse
A selective sweep is the result of a strong positive selection driving newly occurring or standing genetic variants to fixation, and can dramatically alter the pattern and distribution of allelic diversity in a population. Population-level sequencing data have enabled discoveries of selective sweeps associated with genes involved in recent adaptions...Didion, J P ; Morgan, A P ; Yadgary, L ; Bell, T A ; McMullan, R C …
house mouse, selfish genes, Meiotic drive, selective sweep, and R2d2
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2016
Journal article
Rodents: food or pests in Neolithic Orkney
Rodents have important effects on contemporary human societies, sometimes providing a source of food but more often as agricultural pests, or as vectors and reservoirs of disease. Skeletal remains of rodents are commonly found in archaeological assemblages from around the world, highlighting their potential importance to ancient human populations. However,...Romaniuk, Andrzej A ; Shepherd, Alexandra N ; Clarke, David V ; Sheridan, J A ; Fraser, Sheena …
Rodentia, Microtus arvalis, human subsistence, archaeology, and animal osteology
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2016
Journal article
Post-glacial colonization of eastern Europe by the wood mouse, Apodemus sylvaticus: evidence of a northern refugium and dispersal with humans
The wood mouse Apodemus sylvaticus is an opportunistic rodent that is found throughout most of the European mainland. It is present on many islands around the margins of the continent and in northern Africa. The species has been the subject of previous phylogeographical studies, although these have focussed on the... -
2016
Journal article
Between the Balkans and the Baltic: Phylogeography of a common vole Mitochondrial DNA lineage limited to Central Europe
The common vole (Microtus arvalis) has been a model species of small mammal for studying end-glacial colonization history. In the present study we expanded the sampling from central and eastern Europe, analyzing contemporary genetic structure to identify the role of a potential ‘northern glacial refugium’, i.e. a refugium at a...Stojak, Joanna ; McDevitt, Allan D ; Herman, Jeremy S ; Kryštufek, Boris ; Uhlíková, Jitka …
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2017
Journal article
Endemic species may have complex histories: within-refugium phylogeography of an endangered Iberian vole
Glacial refugia protected and promoted biodiversity during the Pleistocene, not only at a broader scale, but also for many endemics that contracted and expanded their ranges within refugial areas. Understanding the evolutionary history of refugial endemics is especially important in the case of endangered species to recognize the origins of...Barbosa, S ; Paupério, J ; Herman, Jeremy S ; Ferreira, C M ; Pita, R …
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2015
Journal article
Osteoarthritis of the temporo-mandibular joint in free-living Soay sheep on St Kilda
Osteoarthritis (OA) is a common degenerative disease of synovial joints with the potential to cause pathology and welfare issues in both domestic and wild ruminants. Previous work has identified OA of the elbow joint in domestic sheep, but the prevalence of OA of the jaw and in particular the temporomandibular...Stojak, J ; McDevitt, A D ; Herman, Jeremy S ; Searle, Jeremy B ; Wojcik, J M
Radiography, Sheep, Temporo-mandibular joints, St Kilda, and Osteoarthritis