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2024
Journal article
The genome of the black-footed cat: Revealing a rich natural history and urgent conservation priorities for small felids
Habitat degradation and loss of genetic diversity are common threats faced by almost all of today’s wild cats. Big cats, such as tigers and lions, are of great concern and have received considerable conservation attention through policies and international actions. However, knowledge of and conservation actions for small wild cats...Yuan, Jiaqing ; Kitchener, Andrew C ; Lackey, Laurie Bingaman ; Sun, Ting ; Jiangzuo, Qigao …
INTROGRESSION , CONSERVATION , BLACK-FOOTED CAT, and INBREEDING
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2024
Journal article
A Computed Tomographic Study of the Premolar Teeth of Babyrousa spp.
A photographic and computed tomography (CT) scanning study was carried out on the premolar teeth of 18 adult male Babyrousa babyrussa skulls, 10 skulls of Babyrousa celebensis, including 6 adult males, 1 adult female, 1 subadult male, 1 subadult female, and 1 juvenile male. The occlusal morphology of the permanent...Macdonald, Alastair A ; Ziehmer, Bianca ; Kitchener, Andrew C ; Gelang, Magnus ; Åblad, Björn …
anatomy, Babyrousa spp., wild pig , tooth , root, babirusa , and root canal
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2024
Journal article
Identification of constrained sequence elements across 239 primate genomes
Noncoding DNA is central to our understanding of human gene regulation and complex diseases , and measuring the evolutionary sequence constraint can establish the functional relevance of putative regulatory elements in the human genome . Identifying the genomic elements that have become constrained specifically in primates has been hampered by... -
2023
Journal article
Range-wide whole-genome resequencing of the brown bear reveals drivers of intraspecies divergence
Population-genomic studies can shed new light on the effect of past demographic processes on contemporary population structure. We reassessed phylogeographical patterns of a classic model species of postglacial recolonisation, the brown bear ( ), using a range-wide resequencing dataset of 128 nuclear genomes. In sharp contrast to the erratic geographical...de Jong, Menno J ; Niamir, Aidin ; Wolf, Magnus ; Kitchener, Andrew C ; Lecomte, Nicolas …
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2023
Journal article
A new fossil from the London Clay documents the convergent origin of a “mousebird-like” tarsometatarsus in an early Eocene near-passerine bird
We describe a partial skeleton of a small bird from the lower Eocene London Clay of Walton-on-the-Naze (Essex, UK), which shows close affinities to two phylogenetically controversial early Paleogene taxa, Morsoravis sedilis (lower Eocene of Denmark) and Pumiliornis tessellatus (lower/middle Eocene of Germany). Our phylogenetic analysis supports a clade including...Mayr, Gerald ; Kitchener, Andrew C
Aves, Walton-on-the-Naze, Sororavis solitarius, Eocene, UK, and evolution
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2023
Journal article
Continued survival of the elusive Seram orange melomys (Melomys fulgens)
Many poorly-known small mammals have remained undetected for decades, including , a distinctive orange murid from Seram, Indonesia, that has been unrecorded since 1920. We report previously undocumented specimens of collected in 1993 and 1994, and local ecological knowledge from 2017 including descriptions and recent sightings, providing strong indirect evidence...Turvey, Samuel T ; Jeffree, Timothy E ; Macdonald, Alastair A ; Leus, Kristin ; Kennerley, Rosalind J …
species rediscovery, local ecological knowledge, lost species, extinction, and Indonesia
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2023
Journal article
Historical Mitogenomic Diversity and Population Structuring of Southern Hemisphere Fin Whales
Fin whales Balaenoptera physalus were hunted unsustainably across the globe in the 19th and 20th centuries, leading to vast reductions in population size. Whaling catch records indicate the importance of the Southern Ocean for this species; approximately 730,000 fin whales were harvested during the 20th century in the Southern Hemisphere... -
2023
Journal article
Narrow-beaked trogons from the early Eocene London Clay of Walton-on-the-Naze (Essex, UK)
We describe multiple partial skeletons of a new trogon species from the early Eocene London Clay of Walton-on-the-Naze (Essex, UK), which are among the oldest fossils of the Trogoniformes. , gen. et sp. nov. has a much narrower and more gracile beak than extant trogons, which denotes different ecological attributes...Mayr, Gerald ; De Pietri, Vanesa L ; Kitchener, Andrew C
Eotrogon stenorhynchus, gen. et sp. nov. , Phylogeny, Fossil birds , Paratrogon gallicus , Aves , and Evolution
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2023
Journal article
The prevalence of vestigial teeth in two beaked whale species from the North Atlantic
Beaked whales, Family Ziphiidae, occur in deep offshore and oceanic seas, where they are very difficult to study, so that much of our knowledge about them is derived from stranded animals. Most beaked whales (e.g., genera and ) have only one pair of mandibular teeth. A reduced dentition is widely...Kitchener, Andrew C ; Herman, Jeremy S ; Doeschate, Mariel ten ; Davison, Nicholas J ; Brownlow, Andrew …
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2023
Journal article
The landscape of tolerated genetic variation in humans and primates
Personalized genome sequencing has revealed millions of genetic differences between individuals, but our understanding of their clinical relevance remains largely incomplete. To systematically decipher the effects of human genetic variants, we obtained whole-genome sequencing data for 809 individuals from 233 primate species and identified 4.3 million common protein-altering variants with...Gao, Hong ; Hamp, Tobias ; Ede, Jeffrey ; Schraiber, Joshua G ; McRae, Jeremy …