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Open data and digital morphology

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Resource type
Journal article
Creator (person)
Davies, Thomas G
Rahman, Imran A
Lautenschlager, Stephan
Cunningham, John A
Asher, Robert J
Barrett, Paul M
Bates, Karl T
Bengtson, Stefan
Benson, Roger B J
Boyer, Doug M
Braga, José
Bright, Jen A
Claessens, Leon P A M
Cox, Philip G
Dong, Xi-Ping
Alistair R, Evans
Falkingham, Peter L
Friedman, Matt
Garwood, Russell J
Goswami, Anjali
Hutchinson, John R
Jeffery, Nathan S
Zerina, Johanson
Lebrun, Renaud
Martà­nez-Pérez, Carlos
Marugà¡n-Lobà³n, Jesàºs
O'Higgins, Paul M
Metscher, Brian
Orliac, Maà«va
Rowe, Timothy B
Rà¼cklin, Martin
Sà¡nchez-Villagra, Marcelo R
Shubin, Neil H
Smith, Selena Y
Starck, J Matthias
Stringer, Chris
Summers, Adam P
Sutton, Mark D
Walsh, Stig A
Weisbecker, Vera
Witmer, Lawrence M
Stephen, Wroe
Yin, Zongjun
Emily J, Rayfield
Donoghue, Philip C J
Date published
April 12, 2017
Abstract
Over the past two decades, the development of methods for visualizing and analysing specimens digitally, in three and even four dimensions, has transformed the study of living and fossil organisms. However, the initial promise that the widespread application of such methods would facilitate access to the underlying digital data has not been fully achieved. The underlying datasets for many published studies are not readily or freely available, introducing a barrier to verification and reproducibility, and the reuse of data. There is no current agreement or policy on the amount and type of data that should be made available alongside studies that use, and in some cases are wholly reliant on, digital morphology. Here, we propose a set of recommendations for minimum standards and additional best practice for three-dimensional digital data publication, and review the issues around data storage, management and accessibility.
Journal title
Proceedings of the Royal Society B
Volume
284
Issue
1852
Publisher
Royal Society Publishing
ISSN
0962-8452
Official URL
https://doi.org/10.1098/rspb.2017.0194
Related URL
https://orcid.org/0000-0002-7002-1005
http://nms.ac.uk/collections-research/collections-departments/natural-sciences/palaeobiology/dr-stig-walsh/
DOI
10.1098/rspb.2017.0194
Keywords
computed tomography
phenotype
functional analysis
visualization
digital data
three-dimensional models
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