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  5. Complex Evolutionary History With Extensive Ancestral Gene Flow in an African Primate Radiation

Complex Evolutionary History With Extensive Ancestral Gene Flow in an African Primate Radiation

Resource type
Journal article
Creator (person)
Jensen, Axel
ORCIDORCID logo
Swift, Frances
de Vries, Dorien
Beck, Robin M D
Kuderna, Lukas F K
Knauf, Sascha
Chuma, Idrissa S
Keyyu, Julius D
Kitchener, Andrew C
ORCIDORCID logo
Farh, Kyle
Rogers, Jeffrey
ORCIDORCID logo
Marques-Bonet, Tomas
Detwiler, Kate M
Roos, Christian
Guschanski, Katerina
ORCIDORCID logo
Date published
December 2023
Abstract
Understanding the drivers of speciation is fundamental in evolutionary biology, and recent studies highlight hybridization as an important evolutionary force. Using whole-genome sequencing data from 22 species of guenons (tribe Cercopithecini), one of the world's largest primate radiations, we show that rampant gene flow characterizes their evolutionary history and identify ancient hybridization across deeply divergent lineages that differ in ecology, morphology, and karyotypes. Some hybridization events resulted in mitochondrial introgression between distant lineages, likely facilitated by cointrogression of coadapted nuclear variants. Although the genomic landscapes of introgression were largely lineage specific, we found that genes with immune functions were overrepresented in introgressing regions, in line with adaptive introgression, whereas genes involved in pigmentation and morphology may contribute to reproductive isolation. In line with reports from other systems that hybridization might facilitate diversification, we find that some of the most species-rich guenon clades are of admixed origin. This study provides important insights into the prevalence, role, and outcomes of ancestral hybridization in a large mammalian radiation.
Contributor (person)
O’Connell, Mary
Funder
Funder nameAwards
Swedish Research Council
Journal title
Molecular Biology and Evolution
Volume
40
Issue
12
Article number
msad247
Publisher
Oxford University Press (OUP)
ISSN
0737-4038
eISSN
1537-1719
Date accepted
November 9, 2023
Official URL
https://doi.org/10.1093/molbev/msad247
Related URL
https://www.research.ed.ac.uk/en/publications/complex-evolutionary-history-with-extensive-ancestral-gene-flow-i
https://www.nms.ac.uk/collections-research/collections-departments/natural-sciences/meet-the-team/dr-andrew-kitchener/
Rights statement
In Copyright
Licence
https://creativecommons.org/licenses/by-nc/4.0/
DOI
10.1093/molbev/msad247
Keywords
evolutionary genomics
phylogenomics
speciation
mammalian radiation
guenon
ancient hybridization
Additional information
Full-text available via the official URL
Managed by the British Library and supported by the AHRC

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